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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954911.1_cds_XP_016493605.1_83697
CDS Infomation

[gene=LOC107812930] [db_xref=GeneID:107812930] [protein=phosphoglucan phosphatase DSP4, amyloplastic-like] [protein_id=XP_016493605.1] [location=join(14814..14839,14920..14989,16039..16083,17053..17155,17604..17680,17771..17847,17955..18035,18996..19128,20986..21045,21549..21605,22046..22141,22684..22743,23060..23167,23534..23665)] [gbkey=CDS]
Sequence

ATGAATTGCCTTCAGAATCTTCCCAGATCCTCTGGTTTATCACTGAGAAACTTCACAGGC
ACTACAAAAAAGCCTTATTTCCCCGTTGTTTCACTGGGGATGACAAAATTTGCTGATCAG
CGTCTAAGTATTGTGGCACAGGTTGTATCTGGTTCTGAATCTAGTACAGAGAAGGATGAA
ACAGAGAAGGATGCGGTAAAATCTGATACATACAGTAATGACATGACTGCAGCCATGGGA
GCTGTTTTAACCTATAGGCATGAGTTAGGAATGAACTACAACTTCATCCGTCCAGATTTG
ATTGTTGGGTCATGTCTACAGACTCCTGAGGATGTGGACAAGCTTCGCAGCATTGGAGTA
AAAACTATTTTTTGCTTGCAGCAAAATCCAGATCTCGAATATTTTGGGGTTGATATCGGT
GCAATTCGTGAATATGCCAACAAATGCAGTGATATTGAACACTTGCGTGCCGAAATAAGG
GATTTTGATGCATTTGATTTGAGGTTGCGGCTTCCAGCTGTTGTAAGCAAACTGAGCAAG
GCCGTCAATAGAAATGGGGGTGTGACTTACATACATTGCACCGCTGGACTTGGCAGAGCT
CCGGCAGTTGCGTTGACATATATGTTCTGGGTTCAAGGCTATAAGCTTAGTGAAGCTTTC
AATTTACTCATGAGCAAGCGTTCCTGCTTTCCAAAACTAGATGCCATCAAAAGTGCCACA
GCAGACATTCTTACAGGCCTTAAAAGGAAGCCTGCCACGTTGACATGGTCTGGTGATGAT
TGTAGTACAGTGGAAATATCTGGACTTGATATTGGCTGGGGCCAGAGAATACCCTTGGAA
TTTGATGAGGAACGAGGTTTGTGGACTCTCCAGAGGGATTTGCCTGAAGGACACTATGAA
TACAAGTATATTGTTGATGGTGTATGGACATGCAGTGAGTTTGAGCCCATCACTTCTCCC
AACAAAGATGGACATGTCAACAACTATGTAAAGGTTCTTGACGACAATCCAGACAGCATC
AGTGCAGCAGTTCGGAATAGGATCACTAGTGATGATCCTGATCTTACTTCAGACGAAAGG
CTAATAATTAGGGAATTTCTTGAAGCTTATCCAGACGAAGAATGA

Peptide Sequence

PEP ID

XP_016493605.1
PEP Infomation

PREDICTED: phosphoglucan phosphatase DSP4, amyloplastic-like [Nicotiana tabacum]
Sequence

MNCLQNLPRSSGLSLRNFTGTTKKPYFPVVSLGMTKFADQRLSIVAQVVSGSESSTEKDE
TEKDAVKSDTYSNDMTAAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRSIGV
KTIFCLQQNPDLEYFGVDIGAIREYANKCSDIEHLRAEIRDFDAFDLRLRLPAVVSKLSK
AVNRNGGVTYIHCTAGLGRAPAVALTYMFWVQGYKLSEAFNLLMSKRSCFPKLDAIKSAT
ADILTGLKRKPATLTWSGDDCSTVEISGLDIGWGQRIPLEFDEERGLWTLQRDLPEGHYE
YKYIVDGVWTCSEFEPITSPNKDGHVNNYVKVLDDNPDSISAAVRNRITSDDPDLTSDER
LIIREFLEAYPDEE

Transcript Sequence

Gene sequence data has not been registered.